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US20240059691, Example 1182

E3L032260
Internal ID: BDB032260
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032260/BDB032260.sdf
Basic Properties
Compound ID
E3L032260
Internal ID
BDB032260
Molecular formula
C21H20ClF2N7
Molecular weight
443.889000
Exact mass
443.143678
XLogP
4.7237
TPSA
93.6800
HBA / HBD
6 / 3
Rotatable bonds
8
Heavy atoms / rings
31 / 4
Activity summary
IC50 unknown 25000.00000000 nM
1 activity record(s) imported
InChIKey
FDVFMMRGPVOTGK-UHFFFAOYSA-N
SMILES
Nc1ncc(Cl)c2cc(NCc3ccc(NCCc4nccn4C(F)F)nc3)ccc12
Aliases
BDBM652488 (preferred) US20240059691, Example 1182 (source_name) BDBM652488 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM652488 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652488 Open - 10.7270/Q2NG4VVD
PubChem CID171362678 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Nc1ncc(Cl)c2cc(NCc3ccc(NCCc4nccn4C(F)F)nc3)ccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032260/BDB032260.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032260/BDB032260.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032260/BDB032260.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032260/BDB032260.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032260/BDB032260.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM652488 IC50 25000 nM Low DOI: 10.7270/Q2NG4VVD 1