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US20240059691, Example 1248

E3L032292
Internal ID: BDB032292
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032292/BDB032292.sdf
Basic Properties
Compound ID
E3L032292
Internal ID
BDB032292
Molecular formula
C22H28N6O2
Molecular weight
408.506000
Exact mass
408.227374
XLogP
3.1103
TPSA
95.1700
HBA / HBD
7 / 3
Rotatable bonds
7
Heavy atoms / rings
30 / 4
Activity summary
IC50 unknown 25000.00000000 nM
1 activity record(s) imported
InChIKey
RYNBOZPKKSEGCY-UHFFFAOYSA-N
SMILES
COC(=O)c1c[nH]c2nccc(NCc3ccc(NCC4CCN(C)CC4)nc3)c12
Aliases
BDBM652520 (preferred) US20240059691, Example 1248 (source_name) BDBM652520 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM652520 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652520 Open - 10.7270/Q2NG4VVD
PubChem CID171362706 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COC(=O)c1c[nH]c2nccc(NCc3ccc(NCC4CCN(C)CC4)nc3)c12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032292/BDB032292.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032292/BDB032292.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032292/BDB032292.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032292/BDB032292.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032292/BDB032292.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM652520 IC50 25000 nM Low DOI: 10.7270/Q2NG4VVD 1