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US20240059691, Example 1268

E3L032306
Internal ID: BDB032306
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032306/BDB032306.sdf
Basic Properties
Compound ID
E3L032306
Internal ID
BDB032306
Molecular formula
C22H23N7O
Molecular weight
401.474000
Exact mass
401.196408
XLogP
2.5742
TPSA
105.1200
HBA / HBD
7 / 3
Rotatable bonds
5
Heavy atoms / rings
30 / 5
Activity summary
IC50 unknown 6500.00000000 nM
1 activity record(s) imported
InChIKey
CAWZCEFZKOCTQR-UHFFFAOYSA-N
SMILES
Nc1nccc2c(NCc3ccc(N4CCn5nccc5C4CO)nc3)cccc12
Aliases
BDBM652534 (preferred) US20240059691, Example 1268 (source_name) BDBM652534 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM652534 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652534 Open - 10.7270/Q2NG4VVD
PubChem CID171362717 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Nc1nccc2c(NCc3ccc(N4CCn5nccc5C4CO)nc3)cccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032306/BDB032306.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032306/BDB032306.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032306/BDB032306.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032306/BDB032306.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032306/BDB032306.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM652534 IC50 6500 nM Low DOI: 10.7270/Q2NG4VVD 1