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US20240059691, Example 2184

E3L032375
Internal ID: BDB032375
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032375/BDB032375.sdf
Basic Properties
Compound ID
E3L032375
Internal ID
BDB032375
Molecular formula
C23H27ClFN5
Molecular weight
427.955000
Exact mass
427.193902
XLogP
4.0115
TPSA
57.4200
HBA / HBD
5 / 2
Rotatable bonds
6
Heavy atoms / rings
30 / 4
Activity summary
IC50 unknown 6500.00000000 nM
1 activity record(s) imported
InChIKey
OTZKOBJGNWYHCY-UHFFFAOYSA-N
SMILES
CN1CCN(CCc2ccc(CNc3ccc4c(N)ncc(Cl)c4c3)c(F)c2)CC1
Aliases
BDBM652604 (preferred) US20240059691, Example 2184 (source_name) BDBM652604 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM652604 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652604 Open - 10.7270/Q2NG4VVD
PubChem CID163390559 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCN(CCc2ccc(CNc3ccc4c(N)ncc(Cl)c4c3)c(F)c2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032375/BDB032375.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032375/BDB032375.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032375/BDB032375.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032375/BDB032375.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032375/BDB032375.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM652604 IC50 6500 nM Low DOI: 10.7270/Q2NG4VVD 1