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US20240059691, Example 2188

E3L032379
Internal ID: BDB032379
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032379/BDB032379.sdf
Basic Properties
Compound ID
E3L032379
Internal ID
BDB032379
Molecular formula
C23H28N4O
Molecular weight
376.504000
Exact mass
376.226312
XLogP
4.0399
TPSA
63.4100
HBA / HBD
5 / 2
Rotatable bonds
6
Heavy atoms / rings
28 / 4
Activity summary
IC50 unknown 25000.00000000 nM
1 activity record(s) imported
InChIKey
XIFNXPCBWYAEJW-UHFFFAOYSA-N
SMILES
CN1CCC(OCc2ccc(CNc3ccc4cc(N)ncc4c3)cc2)CC1
Aliases
BDBM652608 (preferred) US20240059691, Example 2188 (source_name) BDBM652608 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM652608 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652608 Open - 10.7270/Q2NG4VVD
PubChem CID170928454 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCC(OCc2ccc(CNc3ccc4cc(N)ncc4c3)cc2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032379/BDB032379.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032379/BDB032379.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032379/BDB032379.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032379/BDB032379.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032379/BDB032379.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM652608 IC50 25000 nM Low DOI: 10.7270/Q2NG4VVD 1