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US20240059691, Example 2195

E3L032386
Internal ID: BDB032386
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032386/BDB032386.sdf
Basic Properties
Compound ID
E3L032386
Internal ID
BDB032386
Molecular formula
C25H30N4O
Molecular weight
402.542000
Exact mass
402.241962
XLogP
4.5725
TPSA
63.4100
HBA / HBD
5 / 2
Rotatable bonds
7
Heavy atoms / rings
30 / 5
Activity summary
IC50 unknown 650.00000000 nM
1 activity record(s) imported
InChIKey
WDKFWBZIMKMRIR-UHFFFAOYSA-N
SMILES
Nc1nccc2cc(NCc3ccc(COC4CCN(C5CC5)CC4)cc3)ccc12
Aliases
BDBM652615 (preferred) US20240059691, Example 2195 (source_name) BDBM652615 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM652615 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652615 Open - 10.7270/Q2NG4VVD
PubChem CID171362770 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Nc1nccc2cc(NCc3ccc(COC4CCN(C5CC5)CC4)cc3)ccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032386/BDB032386.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032386/BDB032386.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032386/BDB032386.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032386/BDB032386.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032386/BDB032386.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM652615 IC50 650 nM Moderate DOI: 10.7270/Q2NG4VVD 1