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US20240059691, Example 2201

E3L032392
Internal ID: BDB032392
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032392/BDB032392.sdf
Basic Properties
Compound ID
E3L032392
Internal ID
BDB032392
Molecular formula
C24H29FN4O
Molecular weight
408.521000
Exact mass
408.232540
XLogP
4.5691
TPSA
63.4100
HBA / HBD
5 / 2
Rotatable bonds
7
Heavy atoms / rings
30 / 4
Activity summary
IC50 unknown 55.00000000 nM
1 activity record(s) imported
InChIKey
JRXMHNDYGQNYAI-UHFFFAOYSA-N
SMILES
CCN1CCC(OCc2ccc(CNc3cccc4c(N)nccc34)c(F)c2)CC1
Aliases
BDBM652621 (preferred) US20240059691, Example 2201 (source_name) BDBM652621 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM652621 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652621 Open - 10.7270/Q2NG4VVD
PubChem CID171362773 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCN1CCC(OCc2ccc(CNc3cccc4c(N)nccc34)c(F)c2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032392/BDB032392.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032392/BDB032392.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032392/BDB032392.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032392/BDB032392.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032392/BDB032392.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM652621 IC50 55 nM High DOI: 10.7270/Q2NG4VVD 1