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US20240059691, Example 2215

E3L032406
Internal ID: BDB032406
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032406/BDB032406.sdf
Basic Properties
Compound ID
E3L032406
Internal ID
BDB032406
Molecular formula
C22H24ClFN4O
Molecular weight
414.912000
Exact mass
414.162267
XLogP
4.0963
TPSA
63.4100
HBA / HBD
5 / 2
Rotatable bonds
6
Heavy atoms / rings
29 / 4
Activity summary
IC50 unknown 25000.00000000 nM
1 activity record(s) imported
InChIKey
SAQOYLCNEVUQKH-UHFFFAOYSA-N
SMILES
Nc1ncc(Cl)c2cc(NCc3ccc(CCN4CCOCC4)cc3F)ccc12
Aliases
BDBM652635 (preferred) US20240059691, Example 2215 (source_name) BDBM652635 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM652635 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652635 Open - 10.7270/Q2NG4VVD
PubChem CID171362783 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Nc1ncc(Cl)c2cc(NCc3ccc(CCN4CCOCC4)cc3F)ccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032406/BDB032406.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032406/BDB032406.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032406/BDB032406.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032406/BDB032406.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032406/BDB032406.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM652635 IC50 25000 nM Low DOI: 10.7270/Q2NG4VVD 1