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US20240059691, Example 4425

E3L032479
Internal ID: BDB032479
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032479/BDB032479.sdf
Basic Properties
Compound ID
E3L032479
Internal ID
BDB032479
Molecular formula
C23H29N5O
Molecular weight
391.519000
Exact mass
391.237211
XLogP
3.9348
TPSA
76.3000
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
29 / 4
Activity summary
IC50 unknown 650.00000000 nM
1 activity record(s) imported
InChIKey
NJDXNEAIGXTHQR-UHFFFAOYSA-N
SMILES
CN1CCC(C)(COc2cc(CNc3ccc4c(N)nccc4c3)ccn2)CC1
Aliases
BDBM652710 (preferred) US20240059691, Example 4425 (source_name) BDBM652710 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM652710 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652710 Open - 10.7270/Q2NG4VVD
PubChem CID171362821 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCC(C)(COc2cc(CNc3ccc4c(N)nccc4c3)ccn2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032479/BDB032479.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032479/BDB032479.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032479/BDB032479.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032479/BDB032479.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032479/BDB032479.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM652710 IC50 650 nM Moderate DOI: 10.7270/Q2NG4VVD 1