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US20240059691, Example 4460

E3L032509
Internal ID: BDB032509
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032509/BDB032509.sdf
Basic Properties
Compound ID
E3L032509
Internal ID
BDB032509
Molecular formula
C21H24N6O
Molecular weight
376.464000
Exact mass
376.201159
XLogP
3.3181
TPSA
81.0700
HBA / HBD
6 / 1
Rotatable bonds
5
Heavy atoms / rings
28 / 4
Activity summary
IC50 unknown 75000.00000000 nM
1 activity record(s) imported
InChIKey
LBGKPJIADAFZOI-UHFFFAOYSA-N
SMILES
CN1CCC(COc2cc(N(C)c3cnc4[nH]cc(C#N)c4c3)ccn2)CC1
Aliases
BDBM652740 (preferred) US20240059691, Example 4460 (source_name) BDBM652740 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM652740 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652740 Open - 10.7270/Q2NG4VVD
PubChem CID171362846 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCC(COc2cc(N(C)c3cnc4[nH]cc(C#N)c4c3)ccn2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032509/BDB032509.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032509/BDB032509.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032509/BDB032509.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032509/BDB032509.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032509/BDB032509.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM652740 IC50 75000 nM Low DOI: 10.7270/Q2NG4VVD 1