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US20240059691, Example 10003

E3L032534
Internal ID: BDB032534
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032534/BDB032534.sdf
Basic Properties
Compound ID
E3L032534
Internal ID
BDB032534
Molecular formula
C24H23F3N8
Molecular weight
480.498000
Exact mass
480.199777
XLogP
4.1840
TPSA
88.9900
HBA / HBD
7 / 1
Rotatable bonds
3
Heavy atoms / rings
35 / 6
Activity summary
IC50 unknown 6500.00000000 nM
1 activity record(s) imported
InChIKey
RVIHDYFOYNJDSF-SFHVURJKSA-N
SMILES
Nc1nccc2c(N3CCC[C@H]3c3ccc(N4CCn5c(nnc5C(F)(F)F)C4)nc3)cccc12
Aliases
BDBM652770 (preferred) US20240059691, Example 10003 (source_name) BDBM652770 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM652770 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652770 Open - 10.7270/Q2NG4VVD
PubChem CID169100201 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Nc1nccc2c(N3CCC[C@H]3c3ccc(N4CCn5c(nnc5C(F)(F)F)C4)nc3)cccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032534/BDB032534.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032534/BDB032534.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032534/BDB032534.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032534/BDB032534.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032534/BDB032534.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM652770 IC50 6500 nM Low DOI: 10.7270/Q2NG4VVD 1