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2-acetamido-N-(5-nitropyridin-2-yl)benzamide

E3L032880
Internal ID: BDB032880
Activity data available Local docking-ready structure
Dock with Q16531
Structure
/e3_file/ligand_db/generated/BDB032880/BDB032880.sdf
Basic Properties
Compound ID
E3L032880
Internal ID
BDB032880
Molecular formula
C14H12N4O4
Molecular weight
300.274000
Exact mass
300.085855
XLogP
2.2005
TPSA
114.2300
HBA / HBD
5 / 2
Rotatable bonds
4
Heavy atoms / rings
22 / 2
Activity summary
Kd unknown 60000.00000000 nM
1 activity record(s) imported
InChIKey
PSGWAKGWNRQZMM-UHFFFAOYSA-N
SMILES
CC(=O)Nc1ccccc1C(=O)Nc1ccc([N+](=O)[O-])cn1
Aliases
BDBM655651 (preferred) 2-acetamido-N-(5-nitropyridin-2-yl)benzamide (source_name) BDBM655651 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q16531 DDB1;XAP1
DNA damage-binding protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM655651 medium
; target=DNA damage-binding protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM655651 Open - 10.7270/Q22N56JB
PubChem CID167361388 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(=O)Nc1ccccc1C(=O)Nc1ccc([N+](=O)[O-])cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032880/BDB032880.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032880/BDB032880.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032880/BDB032880.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032880/BDB032880.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032880/BDB032880.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DNA damage-binding protein 1
Q16531
E3 ligase component 		BindingDB:BDBM655651 Kd 60000 nM Low DOI: 10.7270/Q22N56JB 1