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BDBM655691

E3L032920
Internal ID: BDB032920
Activity data available Local docking-ready structure
Dock with Q16531
Structure
/e3_file/ligand_db/generated/BDB032920/BDB032920.sdf
Basic Properties
Compound ID
E3L032920
Internal ID
BDB032920
Molecular formula
C17H20N4O5S
Molecular weight
392.437000
Exact mass
392.115441
XLogP
3.2932
TPSA
115.6200
HBA / HBD
8 / 2
Rotatable bonds
7
Heavy atoms / rings
27 / 3
Activity summary
Kd unknown 60000.00000000 nM
1 activity record(s) imported
InChIKey
QRNDWIFXLLONAA-UHFFFAOYSA-N
SMILES
CCOc1cc(NC2CCOCC2)ccc1C(=O)Nc1ncc([N+](=O)[O-])s1
Aliases
BDBM655691 (preferred) 2-ethoxy-N-(5-nitrothiazol-2-yl)-4-((tetrahydro-2H-pyran-4-yl)amino)benzamide (source_name) BDBM655691 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q16531 DDB1;XAP1
DNA damage-binding protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM655691 medium
; target=DNA damage-binding protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM655691 Open - 10.7270/Q22N56JB
PubChem CID167361560 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCOc1cc(NC2CCOCC2)ccc1C(=O)Nc1ncc([N+](=O)[O-])s1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032920/BDB032920.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032920/BDB032920.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032920/BDB032920.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032920/BDB032920.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032920/BDB032920.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DNA damage-binding protein 1
Q16531
E3 ligase component 		BindingDB:BDBM655691 Kd 60000 nM Low DOI: 10.7270/Q22N56JB 1