< Back to small molecule database

BDBM656610

E3L033143
Internal ID: BDB033143
Activity data available Local docking-ready structure
Dock with Q03164
Structure
/e3_file/ligand_db/generated/BDB033143/BDB033143.sdf
Basic Properties
Compound ID
E3L033143
Internal ID
BDB033143
Molecular formula
C33H49FN6O5S
Molecular weight
660.857000
Exact mass
660.346918
XLogP
4.4446
TPSA
117.2000
HBA / HBD
9 / 1
Rotatable bonds
11
Heavy atoms / rings
46 / 5
Activity summary
Ki < 1.00000000 nM
1 activity record(s) imported
InChIKey
RJIMETIFOXQUCE-SXOMAYOGSA-N
SMILES
CC(C)N(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@@H]3CC[C@@H](NS(=O)(=O)C(C)C)CO3)CC2)C1)C(C)C
Aliases
BDBM656610 (preferred) BDBM656610 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q03164 KMT2A;ALL1;CXXC7;HRX;HTRX;MLL;MLL1;TRX1
Histone-lysine N-methyltransferase 2A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM656610 medium
; target=Menin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM656610 Open - 10.7270/Q2CV4P1W
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)N(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@@H]3CC[C@@H](NS(=O)(=O)C(C)C)CO3)CC2)C1)C(C)C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB033143/BDB033143.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB033143/BDB033143.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB033143/BDB033143.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB033143/BDB033143.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB033143/BDB033143.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Menin
Q03164
E3 ligase component 		BindingDB:BDBM656610 Ki <1 nM Very high DOI: 10.7270/Q2CV4P1W 1