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US20240166635, Example 26

E3L033700
Internal ID: BDB033700
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB033700/BDB033700.sdf
Basic Properties
Compound ID
E3L033700
Internal ID
BDB033700
Molecular formula
C17H19N5O4S
Molecular weight
389.437000
Exact mass
389.115775
XLogP
1.2922
TPSA
137.2300
HBA / HBD
8 / 3
Rotatable bonds
6
Heavy atoms / rings
27 / 3
Activity summary
IC50 > 1000.00000000 nM
1 activity record(s) imported
InChIKey
HCBVVIFOIUAUCN-GICMACPYSA-N
SMILES
CNS(=O)(=O)c1ccc(Nc2ncc(C#N)c(OC3CCC[C@H]3O)n2)cc1
Aliases
BDBM676279 (preferred) US20240166635, Example 26 (source_name) BDBM676279 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM676279 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM676279 Open - 10.7270/Q2GM8CMT
PubChem CID167090307 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNS(=O)(=O)c1ccc(Nc2ncc(C#N)c(OC3CCC[C@H]3O)n2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB033700/BDB033700.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB033700/BDB033700.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB033700/BDB033700.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB033700/BDB033700.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB033700/BDB033700.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM676279 IC50 >1000 nM Moderate DOI: 10.7270/Q2GM8CMT 1