< Back to small molecule database

US20240166635, Example 46a

E3L033717
Internal ID: BDB033717
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB033717/BDB033717.sdf
Basic Properties
Compound ID
E3L033717
Internal ID
BDB033717
Molecular formula
C18H25F2N5O4S
Molecular weight
445.492000
Exact mass
445.159532
XLogP
1.5018
TPSA
128.4400
HBA / HBD
8 / 2
Rotatable bonds
5
Heavy atoms / rings
30 / 3
Activity summary
IC50 < 10.00000000 nM
1 activity record(s) imported
InChIKey
YXQIJCZYWYSLMZ-UHFFFAOYSA-N
SMILES
CC1(O)CCC(F)(F)CC1Oc1nc(NC2CCN(S(C)(=O)=O)CC2)ncc1C#N
Aliases
BDBM676317 (preferred) US20240166635, Example 46a (source_name) BDBM676317 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM676317 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM676317 Open - 10.7270/Q2GM8CMT
PubChem CID167090343 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC1(O)CCC(F)(F)CC1Oc1nc(NC2CCN(S(C)(=O)=O)CC2)ncc1C#N keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB033717/BDB033717.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB033717/BDB033717.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB033717/BDB033717.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB033717/BDB033717.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB033717/BDB033717.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component
BindingDB:BDBM676317 IC50 <10 nM Very high DOI: 10.7270/Q2GM8CMT 1