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US20240166635, Example 56

E3L033727
Internal ID: BDB033727
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB033727/BDB033727.sdf
Basic Properties
Compound ID
E3L033727
Internal ID
BDB033727
Molecular formula
C17H26N6O3S
Molecular weight
394.501000
Exact mass
394.178710
XLogP
1.3872
TPSA
134.2300
HBA / HBD
7 / 2
Rotatable bonds
6
Heavy atoms / rings
27 / 3
Activity summary
IC50 unknown 550.00000000 nM
1 activity record(s) imported
InChIKey
WGPONUKJUHDRKT-UHFFFAOYSA-N
SMILES
CC1(COc2nc(NC3CCN(S(N)(=O)=O)CC3)ncc2C#N)CCCC1
Aliases
BDBM676335 (preferred) US20240166635, Example 56 (source_name) BDBM676335 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM676335 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM676335 Open - 10.7270/Q2GM8CMT
PubChem CID167089921 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC1(COc2nc(NC3CCN(S(N)(=O)=O)CC3)ncc2C#N)CCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB033727/BDB033727.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB033727/BDB033727.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB033727/BDB033727.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB033727/BDB033727.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB033727/BDB033727.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM676335 IC50 550 nM Moderate DOI: 10.7270/Q2GM8CMT 1