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US12012467, Example 278

E3L034062
Internal ID: BDB034062
Activity data available Local docking-ready structure
Dock with Q96GG9
Structure
/e3_file/ligand_db/generated/BDB034062/BDB034062.sdf
Basic Properties
Compound ID
E3L034062
Internal ID
BDB034062
Molecular formula
C33H54N8O5S
Molecular weight
674.913000
Exact mass
674.393788
XLogP
2.4207
TPSA
210.4300
HBA / HBD
8 / 7
Rotatable bonds
19
Heavy atoms / rings
47 / 2
Activity summary
IC50 unknown 68.00000000 nM
1 activity record(s) imported
InChIKey
OCKZZPFBEKFNNZ-ASZYQHJZSA-N
SMILES
CC[C@H](C)[C@H](NC(=O)[C@H](Cc1nc2ccc(C(C)C)cc2s1)NC(=O)NC)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(N)=O
Aliases
BDBM681131 (preferred) US12012467, Example 278 (source_name) BDBM681131 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96GG9 DCUN1D1;DCN1;DCUN1L1;RP42;SCCRO
DCN1-like protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM681131 medium
; target=DCN1-like protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM681131 Open - 10.7270/Q2SQ94P1
PubChem CID171991131 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC[C@H](C)[C@H](NC(=O)[C@H](Cc1nc2ccc(C(C)C)cc2s1)NC(=O)NC)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(N)=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB034062/BDB034062.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB034062/BDB034062.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB034062/BDB034062.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB034062/BDB034062.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB034062/BDB034062.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DCN1-like protein 1
Q96GG9
E3 ligase component 		BindingDB:BDBM681131 IC50 68 nM High DOI: 10.7270/Q2SQ94P1 1