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CRBN modulator-1

E3L034142
Internal ID: BDB034142
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB034142/BDB034142.sdf
Basic Properties
Compound ID
E3L034142
Internal ID
BDB034142
Molecular formula
C17H12N2O5
Molecular weight
324.292000
Exact mass
324.074621
XLogP
0.9466
TPSA
103.7800
HBA / HBD
5 / 2
Rotatable bonds
1
Heavy atoms / rings
24 / 4
Activity summary
Ki unknown 980.00000000 nM
2 activity record(s) imported
InChIKey
WGTKYDFLBDSIPX-UHFFFAOYSA-N
SMILES
O=C1CCC(N2C(=O)c3cccc4cc(O)cc(c34)C2=O)C(=O)N1
Aliases
BDBM684558 (preferred) CRBN modulator-1 (source_name) BDBM684558 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM684558 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM684558 Open - 10.7270/Q20Z77MW
PubChem CID152258126 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1CCC(N2C(=O)c3cccc4cc(O)cc(c34)C2=O)C(=O)N1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB034142/BDB034142.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB034142/BDB034142.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB034142/BDB034142.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB034142/BDB034142.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB034142/BDB034142.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM684558 IC50 3500 nM Low DOI: 10.7270/Q20Z77MW 1
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM684558 Ki 980 nM Moderate DOI: 10.7270/Q20Z77MW 1