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US12110286, Example 1d

E3L034667
Internal ID: BDB034667
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB034667/BDB034667.sdf
Basic Properties
Compound ID
E3L034667
Internal ID
BDB034667
Molecular formula
C23H23ClN8O2
Molecular weight
478.944000
Exact mass
478.163250
XLogP
3.2111
TPSA
122.5600
HBA / HBD
6 / 2
Rotatable bonds
7
Heavy atoms / rings
34 / 4
Activity summary
IC50 unknown 912.00000000 nM
1 activity record(s) imported
InChIKey
LLKCWYLUZPVJTK-AWEZNQCLSA-N
SMILES
CNC(=O)c1cc(Nc2ccc3c(c2)n(CC[C@H](C)n2cccn2)c(=O)n3C)c(C#N)c(Cl)n1
Aliases
BDBM699418 (preferred) US12110286, Example 1d (source_name) BDBM699418 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM699418 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM699418 Open - 10.7270/Q2M049Z0
PubChem CID142478619 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)c1cc(Nc2ccc3c(c2)n(CC[C@H](C)n2cccn2)c(=O)n3C)c(C#N)c(Cl)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB034667/BDB034667.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB034667/BDB034667.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB034667/BDB034667.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB034667/BDB034667.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB034667/BDB034667.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component
BindingDB:BDBM699418 IC50 912 nM Moderate DOI: 10.7270/Q2M049Z0 1