< Back to small molecule database

US12110286, Example 18b

E3L034722
Internal ID: BDB034722
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB034722/BDB034722.sdf
Basic Properties
Compound ID
E3L034722
Internal ID
BDB034722
Molecular formula
C17H16ClN5O3S
Molecular weight
405.867000
Exact mass
405.066238
XLogP
2.0483
TPSA
109.7800
HBA / HBD
6 / 1
Rotatable bonds
5
Heavy atoms / rings
27 / 3
Activity summary
IC50 unknown 4898.00000000 nM
1 activity record(s) imported
InChIKey
YRQIJIPNYKVWSY-UHFFFAOYSA-N
SMILES
Cn1c(=O)n(CCS(C)(=O)=O)c2cc(Nc3ccnc(Cl)c3C#N)ccc21
Aliases
BDBM699561 (preferred) US12110286, Example 18b (source_name) BDBM699561 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM699561 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM699561 Open - 10.7270/Q2M049Z0
PubChem CID135386072 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1c(=O)n(CCS(C)(=O)=O)c2cc(Nc3ccnc(Cl)c3C#N)ccc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB034722/BDB034722.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB034722/BDB034722.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB034722/BDB034722.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB034722/BDB034722.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB034722/BDB034722.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component
BindingDB:BDBM699561 IC50 4898 nM Low DOI: 10.7270/Q2M049Z0 1