< Back to small molecule database

US12110286, Example 22e

E3L034744
Internal ID: BDB034744
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB034744/BDB034744.sdf
Basic Properties
Compound ID
E3L034744
Internal ID
BDB034744
Molecular formula
C21H21ClN6O3
Molecular weight
440.891000
Exact mass
440.136366
XLogP
3.2345
TPSA
105.1800
HBA / HBD
6 / 1
Rotatable bonds
5
Heavy atoms / rings
31 / 4
Activity summary
IC50 unknown 1318.00000000 nM
1 activity record(s) imported
InChIKey
WFKVWIODEZBUPZ-UHFFFAOYSA-N
SMILES
CCC1(Cn2c(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc32)CN(C)C(=O)O1
Aliases
BDBM699591 (preferred) US12110286, Example 22e (source_name) BDBM699591 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM699591 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM699591 Open - 10.7270/Q2M049Z0
PubChem CID135386081 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCC1(Cn2c(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc32)CN(C)C(=O)O1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB034744/BDB034744.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB034744/BDB034744.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB034744/BDB034744.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB034744/BDB034744.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB034744/BDB034744.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component
BindingDB:BDBM699591 IC50 1318 nM Low DOI: 10.7270/Q2M049Z0 1