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US20240409538, Example 26

E3L035172
Internal ID: BDB035172
Activity data available Local docking-ready structure
Dock with Q8TAF3
Structure
/e3_file/ligand_db/generated/BDB035172/BDB035172.sdf
Basic Properties
Compound ID
E3L035172
Internal ID
BDB035172
Molecular formula
C28H25F4N7O2
Molecular weight
567.547000
Exact mass
567.200586
XLogP
5.7130
TPSA
92.2500
HBA / HBD
7 / 0
Rotatable bonds
8
Heavy atoms / rings
41 / 6
Activity summary
IC50 unknown 40.00000000 nM
1 activity record(s) imported
InChIKey
CPLNQBDFWYAGLD-UHFFFAOYSA-N
SMILES
CCn1cc(C(F)(F)F)nc1-c1c(F)cc(Cc2cccn3nc(-c4c(OC)ncnc4C4CC4)nc23)cc1OC
Aliases
BDBM707424 (preferred) US20240409538, Example 26 (source_name) BDBM707424 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q8TAF3 WDR48;KIAA1449;UAF1
WD repeat-containing protein 48		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM707424 medium
; target=Ubiquitin carboxyl-terminal hydrolase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM707424 Open - 10.7270/Q2GF1018
PubChem CID171782544 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCn1cc(C(F)(F)F)nc1-c1c(F)cc(Cc2cccn3nc(-c4c(OC)ncnc4C4CC4)nc23)cc1OC keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB035172/BDB035172.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB035172/BDB035172.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB035172/BDB035172.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB035172/BDB035172.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB035172/BDB035172.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Ubiquitin carboxyl-terminal hydrolase 1
Q8TAF3
E3 ligase component 		BindingDB:BDBM707424 IC50 40 nM High DOI: 10.7270/Q2GF1018 1