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BDBM708503

E3L035221
Internal ID: BDB035221
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB035221/BDB035221.sdf
Basic Properties
Compound ID
E3L035221
Internal ID
BDB035221
Molecular formula
C28H37N5O4
Molecular weight
507.635000
Exact mass
507.284555
XLogP
2.6695
TPSA
114.3500
HBA / HBD
7 / 3
Rotatable bonds
9
Heavy atoms / rings
37 / 7
Activity summary
IC50 unknown 3340.00000000 nM
1 activity record(s) imported
InChIKey
YVJHNFNJNSZQNV-UHFFFAOYSA-N
SMILES
Cc1nc2cccc(NCCOCCNC34CC5CC(CC(C5)C3)C4)c2c(=O)n1C1CCC(=O)NC1=O
Aliases
BDBM708503 (preferred) 3-(5-((2-(2-(((1s,3s)-adamantan-1-yl)amino)ethoxy)ethyl)amino)-2-methyl-4-oxoquinazolin-3(4H)-yl) piperidine-2,6-dione (source_name) BDBM708503 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM708503 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM708503 Open - 10.7270/Q23201CK
PubChem CID169093882 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1nc2cccc(NCCOCCNC34CC5CC(CC(C5)C3)C4)c2c(=O)n1C1CCC(=O)NC1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB035221/BDB035221.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB035221/BDB035221.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB035221/BDB035221.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB035221/BDB035221.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB035221/BDB035221.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component 		BindingDB:BDBM708503 IC50 3340 nM Low DOI: 10.7270/Q23201CK 1