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US20240425497, Example 6

E3L035280
Internal ID: BDB035280
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB035280/BDB035280.sdf
Basic Properties
Compound ID
E3L035280
Internal ID
BDB035280
Molecular formula
C33H36FN5O2
Molecular weight
553.682000
Exact mass
553.285304
XLogP
5.8662
TPSA
83.0200
HBA / HBD
4 / 2
Rotatable bonds
7
Heavy atoms / rings
41 / 7
Activity summary
IC50 < 100.00000000 nM
1 activity record(s) imported
InChIKey
IYWXIELCPPIKSI-IBGZPJMESA-N
SMILES
CNC(=O)c1cc(F)ccc1-c1cc(C2CC2)nc(-n2cc(C3CC3)c3cc(CN4CCC[C@H](C)C4)[nH]c3c2=O)c1
Aliases
BDBM708678 (preferred) US20240425497, Example 6 (source_name) BDBM708678 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM708678 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM708678 Open - 10.7270/Q2FB57G5
PubChem CID175664510 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)c1cc(F)ccc1-c1cc(C2CC2)nc(-n2cc(C3CC3)c3cc(CN4CCC[C@H](C)C4)[nH]c3c2=O)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB035280/BDB035280.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB035280/BDB035280.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB035280/BDB035280.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB035280/BDB035280.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB035280/BDB035280.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component 		BindingDB:BDBM708678 IC50 <100 nM High DOI: 10.7270/Q2FB57G5 1