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US20240425497, Example 26

E3L035300
Internal ID: BDB035300
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB035300/BDB035300.sdf
Basic Properties
Compound ID
E3L035300
Internal ID
BDB035300
Molecular formula
C30H30F2N6O3
Molecular weight
560.605000
Exact mass
560.234745
XLogP
3.8069
TPSA
96.3500
HBA / HBD
6 / 1
Rotatable bonds
6
Heavy atoms / rings
41 / 7
Activity summary
IC50 < 100.00000000 nM
1 activity record(s) imported
InChIKey
DCJZZYVMLVNJRY-QGZVFWFLSA-N
SMILES
C[C@@H]1CN(Cc2cc3ncn(-c4cc(-c5ccc(F)cc5C(=O)N5CC(F)C5)cc(C5CC5)n4)c(=O)c3[nH]2)CCO1
Aliases
BDBM708698 (preferred) US20240425497, Example 26 (source_name) BDBM708698 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM708698 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM708698 Open - 10.7270/Q2FB57G5
PubChem CID175664529 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H]1CN(Cc2cc3ncn(-c4cc(-c5ccc(F)cc5C(=O)N5CC(F)C5)cc(C5CC5)n4)c(=O)c3[nH]2)CCO1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB035300/BDB035300.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB035300/BDB035300.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB035300/BDB035300.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB035300/BDB035300.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB035300/BDB035300.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component 		BindingDB:BDBM708698 IC50 <100 nM High DOI: 10.7270/Q2FB57G5 1