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US20240425497, Example 38

E3L035312
Internal ID: BDB035312
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB035312/BDB035312.sdf
Basic Properties
Compound ID
E3L035312
Internal ID
BDB035312
Molecular formula
C28H28F3N7O3
Molecular weight
567.572000
Exact mass
567.220572
XLogP
3.3566
TPSA
109.2400
HBA / HBD
7 / 1
Rotatable bonds
9
Heavy atoms / rings
41 / 6
Activity summary
IC50 < 100.00000000 nM
1 activity record(s) imported
InChIKey
LVDJPMFLNVMYKO-UHFFFAOYSA-N
SMILES
COCCN(C)Cc1cc2ncn(-c3nc(-c4ccc(F)cc4C(=O)N4CC(F)(F)C4)cc(C4CC4)n3)c(=O)c2[nH]1
Aliases
BDBM708710 (preferred) US20240425497, Example 38 (source_name) BDBM708710 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B
reported_binder bindingdb_reported Yes No low BindingDB:BDBM708710 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM708710 Open - 10.7270/Q2FB57G5
PubChem CID175664538 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COCCN(C)Cc1cc2ncn(-c3nc(-c4ccc(F)cc4C(=O)N4CC(F)(F)C4)cc(C4CC4)n3)c(=O)c2[nH]1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB035312/BDB035312.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB035312/BDB035312.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB035312/BDB035312.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB035312/BDB035312.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB035312/BDB035312.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component
BindingDB:BDBM708710 IC50 <100 nM High DOI: 10.7270/Q2FB57G5 1