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US20240425497, Example 42

E3L035316
Internal ID: BDB035316
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB035316/BDB035316.sdf
Basic Properties
Compound ID
E3L035316
Internal ID
BDB035316
Molecular formula
C30H30F3N5O2
Molecular weight
549.597000
Exact mass
549.235160
XLogP
5.2340
TPSA
83.0200
HBA / HBD
4 / 2
Rotatable bonds
8
Heavy atoms / rings
40 / 6
Activity summary
IC50 < 100.00000000 nM
1 activity record(s) imported
InChIKey
WIFMNQNANNJGKS-UHFFFAOYSA-N
SMILES
CC(C)CNCc1cc2ncn(-c3cc(-c4ccc(F)cc4C(=O)N4CC(F)(F)C4)cc(C4CC4)c3)c(=O)c2[nH]1
Aliases
BDBM708714 (preferred) US20240425497, Example 42 (source_name) BDBM708714 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B
reported_binder bindingdb_reported Yes No low BindingDB:BDBM708714 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM708714 Open - 10.7270/Q2FB57G5
PubChem CID175664541 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)CNCc1cc2ncn(-c3cc(-c4ccc(F)cc4C(=O)N4CC(F)(F)C4)cc(C4CC4)c3)c(=O)c2[nH]1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB035316/BDB035316.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB035316/BDB035316.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB035316/BDB035316.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB035316/BDB035316.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB035316/BDB035316.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component
BindingDB:BDBM708714 IC50 <100 nM High DOI: 10.7270/Q2FB57G5 1