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BDBM710898

E3L035606
Internal ID: BDB035606
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB035606/BDB035606.sdf
Basic Properties
Compound ID
E3L035606
Internal ID
BDB035606
Molecular formula
C30H34F3N5O
Molecular weight
537.630000
Exact mass
537.271545
XLogP
6.3486
TPSA
63.0500
HBA / HBD
4 / 1
Rotatable bonds
7
Heavy atoms / rings
39 / 6
Activity summary
Kd unknown 180.00000000 nM
2 activity record(s) imported
InChIKey
WWXRVDUEBRGDFI-AREMUKBSSA-N
SMILES
Cn1cnnc1[C@@H](c1cccc(N2Cc3c(cc(CNC4(C)CCC4)cc3C(F)(F)F)C2=O)c1)C1CCCC1
Aliases
BDBM710898 (preferred) (R)-2-(3-(cyclopentyl(4-methyl-4H-1,2,4-triazol-3-yl)methyl)phenyl)-6-(((1-methylcyclobutyl)amino)methyl)-4-(trifluoromethyl)isoindolin-1-one (source_name) BDBM710898 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM710898 medium
; target=E3 ubiquitin-protein ligase CBL-B; Tyrosine-protein kinase Lck
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM710898 Open - 10.7270/Q2G44VSH
PubChem CID168262478 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1cnnc1[C@@H](c1cccc(N2Cc3c(cc(CNC4(C)CCC4)cc3C(F)(F)F)C2=O)c1)C1CCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB035606/BDB035606.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB035606/BDB035606.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB035606/BDB035606.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB035606/BDB035606.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB035606/BDB035606.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component 		BindingDB:BDBM710898 Kd 180 nM Moderate DOI: 10.7270/Q2G44VSH 1
Tyrosine-protein kinase Lck
Q13191
E3 ligase component 		BindingDB:BDBM710898 IC50 210 nM Moderate DOI: 10.7270/Q2G44VSH 1