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US20250051324, Example 1

E3L035911
Internal ID: BDB035911
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB035911/BDB035911.sdf
Basic Properties
Compound ID
E3L035911
Internal ID
BDB035911
Molecular formula
C23H24F3N5O2
Molecular weight
459.472000
Exact mass
459.188210
XLogP
2.6194
TPSA
78.4300
HBA / HBD
6 / 1
Rotatable bonds
4
Heavy atoms / rings
33 / 4
Activity summary
IC50 unknown 1.33000000 nM
2 activity record(s) imported
InChIKey
RVKIODKELWOUEW-UHFFFAOYSA-N
SMILES
CNC(=O)c1ccc(N2CCN(Cc3cc4c(cn3)C(C)=C(C(F)(F)F)C(=O)C4)CC2)cn1
Aliases
BDBM720206 (preferred) US20250051324, Example 1 (source_name) BDBM720206 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM720206 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM720206 Open - 10.7270/Q2Q244S9
PubChem CID175681731 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)c1ccc(N2CCN(Cc3cc4c(cn3)C(C)=C(C(F)(F)F)C(=O)C4)CC2)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB035911/BDB035911.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB035911/BDB035911.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB035911/BDB035911.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB035911/BDB035911.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB035911/BDB035911.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM720206 IC50 1.33 nM Very high DOI: 10.7270/Q2Q244S9 1
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM720206 IC50 2.78 nM Very high DOI: 10.7270/Q2Q244S9 1