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US20250051324, Example 18

E3L035923
Internal ID: BDB035923
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB035923/BDB035923.sdf
Basic Properties
Compound ID
E3L035923
Internal ID
BDB035923
Molecular formula
C23H22F3N5O2
Molecular weight
457.456000
Exact mass
457.172560
XLogP
2.7544
TPSA
78.4300
HBA / HBD
6 / 1
Rotatable bonds
3
Heavy atoms / rings
33 / 5
Activity summary
IC50 unknown 16.00000000 nM
1 activity record(s) imported
InChIKey
KTWKIGMSLVSYSA-UHFFFAOYSA-N
SMILES
CC1=C(C(F)(F)F)C(=O)Cc2cc(CN3CCN(c4ccc5c(n4)CC(=O)N5)CC3)cnc21
Aliases
BDBM720218 (preferred) US20250051324, Example 18 (source_name) BDBM720218 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM720218 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM720218 Open - 10.7270/Q2Q244S9
PubChem CID175681741 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC1=C(C(F)(F)F)C(=O)Cc2cc(CN3CCN(c4ccc5c(n4)CC(=O)N5)CC3)cnc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB035923/BDB035923.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB035923/BDB035923.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB035923/BDB035923.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB035923/BDB035923.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB035923/BDB035923.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM720218 IC50 16 nM High DOI: 10.7270/Q2Q244S9 1