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BDBM725716

E3L036110
Internal ID: BDB036110
Activity data available Local docking-ready structure
Dock with Q03164
Structure
/e3_file/ligand_db/generated/BDB036110/BDB036110.sdf
Basic Properties
Compound ID
E3L036110
Internal ID
BDB036110
Molecular formula
C38H54FN5O5
Molecular weight
679.878000
Exact mass
679.410898
XLogP
5.9994
TPSA
97.3300
HBA / HBD
9 / 0
Rotatable bonds
12
Heavy atoms / rings
49 / 6
Activity summary
IC50 unknown 5.00000000 nM
1 activity record(s) imported
InChIKey
BNULHIXIQDKZQQ-KJJHEHLZSA-N
SMILES
CCN(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CC3)CC(=O)C(COC)(COC)C4)CC2)C1)C(C)C
Aliases
BDBM725716 (preferred) BDBM725716 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q03164 KMT2A;ALL1;CXXC7;HRX;HTRX;MLL;MLL1;TRX1
Histone-lysine N-methyltransferase 2A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM725716 medium
; target=Histone-lysine N-methyltransferase 2A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM725716 Open - 10.7270/Q2D79GZH
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCN(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CC3)CC(=O)C(COC)(COC)C4)CC2)C1)C(C)C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB036110/BDB036110.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB036110/BDB036110.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB036110/BDB036110.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB036110/BDB036110.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB036110/BDB036110.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone-lysine N-methyltransferase 2A
Q03164
E3 ligase component 		BindingDB:BDBM725716 IC50 5 nM Very high DOI: 10.7270/Q2D79GZH 1