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US20250082630, Example 12

E3L036183
Internal ID: BDB036183
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB036183/BDB036183.sdf
Basic Properties
Compound ID
E3L036183
Internal ID
BDB036183
Molecular formula
C23H24F3N5O2
Molecular weight
459.472000
Exact mass
459.188210
XLogP
2.5973
TPSA
77.9000
HBA / HBD
6 / 1
Rotatable bonds
5
Heavy atoms / rings
33 / 4
Activity summary
IC50 unknown 15.00000000 nM
1 activity record(s) imported
InChIKey
HRZWIYWTELMPMI-ZDUSSCGKSA-N
SMILES
CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3F)CC(=O)C([C@H](C)F)=N4)CC2)c(F)n1
Aliases
BDBM726507 (preferred) US20250082630, Example 12 (source_name) BDBM726507 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM726507 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM726507 Open - 10.7270/Q27M0DG7
PubChem CID176456436 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3F)CC(=O)C([C@H](C)F)=N4)CC2)c(F)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB036183/BDB036183.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB036183/BDB036183.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB036183/BDB036183.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB036183/BDB036183.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB036183/BDB036183.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM726507 IC50 15 nM High DOI: 10.7270/Q27M0DG7 1