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US20250082630, Example 16

E3L036187
Internal ID: BDB036187
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB036187/BDB036187.sdf
Basic Properties
Compound ID
E3L036187
Internal ID
BDB036187
Molecular formula
C22H24ClN5O2
Molecular weight
425.920000
Exact mass
425.161853
XLogP
2.6344
TPSA
77.9000
HBA / HBD
6 / 1
Rotatable bonds
4
Heavy atoms / rings
30 / 4
Activity summary
IC50 unknown 10.00000000 nM
1 activity record(s) imported
InChIKey
JUAADAVFKOCHKY-UHFFFAOYSA-N
SMILES
CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3Cl)CC(=O)C(C)=N4)CC2)cn1
Aliases
BDBM726511 (preferred) US20250082630, Example 16 (source_name) BDBM726511 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM726511 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM726511 Open - 10.7270/Q27M0DG7
PubChem CID163736535 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3Cl)CC(=O)C(C)=N4)CC2)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB036187/BDB036187.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB036187/BDB036187.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB036187/BDB036187.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB036187/BDB036187.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB036187/BDB036187.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM726511 IC50 10 nM Very high DOI: 10.7270/Q27M0DG7 1