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US20250082630, Example 33

E3L036204
Internal ID: BDB036204
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB036204/BDB036204.sdf
Basic Properties
Compound ID
E3L036204
Internal ID
BDB036204
Molecular formula
C20H21FN6O2
Molecular weight
396.426000
Exact mass
396.171002
XLogP
1.1390
TPSA
94.2200
HBA / HBD
6 / 2
Rotatable bonds
4
Heavy atoms / rings
29 / 4
Activity summary
IC50 unknown 167.00000000 nM
1 activity record(s) imported
InChIKey
XNYHAULPSUMSCW-UHFFFAOYSA-N
SMILES
CNC(=O)c1ccc(N2CCN(Cc3ccc4ncc(=O)[nH]c4c3F)CC2)cn1
Aliases
BDBM726528 (preferred) US20250082630, Example 33 (source_name) BDBM726528 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM726528 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM726528 Open - 10.7270/Q27M0DG7
PubChem CID162524503 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)c1ccc(N2CCN(Cc3ccc4ncc(=O)[nH]c4c3F)CC2)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB036204/BDB036204.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB036204/BDB036204.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB036204/BDB036204.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB036204/BDB036204.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB036204/BDB036204.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM726528 IC50 167 nM Moderate DOI: 10.7270/Q27M0DG7 1