< Back to small molecule database

US20250122183, Example 043

E3L036483
Internal ID: BDB036483
Activity data available Local docking-ready structure
Dock with Q6IE81 Dock with Q92794
Structure
/e3_file/ligand_db/generated/BDB036483/BDB036483.sdf
Basic Properties
Compound ID
E3L036483
Internal ID
BDB036483
Molecular formula
C20H21N5O7S
Molecular weight
475.483000
Exact mass
475.116169
XLogP
3.3434
TPSA
150.8400
HBA / HBD
11 / 2
Rotatable bonds
9
Heavy atoms / rings
33 / 4
Activity summary
Ki unknown 56.00000000 nM
3 activity record(s) imported
InChIKey
YPEYCEISEGWNHO-UHFFFAOYSA-N
SMILES
CCc1nc(Nc2cc3onc(NS(=O)(=O)c4c(OC)cccc4OC)c3cc2OC)no1
Aliases
BDBM730830 (preferred) US20250122183, Example 043 (source_name) BDBM730830 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q6IE81 JADE1;KIAA1807;PHF17
Protein Jade-1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM730830 medium
; target=Histone acetyltransferase KAT6A
Q92794 KAT6A;MOZ;MYST3;RUNXBP2;ZNF220
Histone acetyltransferase KAT6A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM730830 medium
; target=Histone acetyltransferase KAT6A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM730830 Open - 10.7270/Q2V129C4
PubChem CID176511359 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCc1nc(Nc2cc3onc(NS(=O)(=O)c4c(OC)cccc4OC)c3cc2OC)no1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB036483/BDB036483.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB036483/BDB036483.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB036483/BDB036483.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB036483/BDB036483.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB036483/BDB036483.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone acetyltransferase KAT6A
Q6IE81
E3 ligase component 		BindingDB:BDBM730830 Ki >2337 nM Low DOI: 10.7270/Q2V129C4 1
Histone acetyltransferase KAT6A
Q92794
E3 ligase component 		BindingDB:BDBM730830 Ki 56 nM High DOI: 10.7270/Q2V129C4 1
Histone acetyltransferase KAT6A
Q92794
E3 ligase component 		BindingDB:BDBM730830 Ki >2337 nM Low DOI: 10.7270/Q2V129C4 1