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US20250122183, Example 055

E3L036495
Internal ID: BDB036495
Activity data available Local docking-ready structure
Dock with Q6IE81 Dock with Q92794
Structure
/e3_file/ligand_db/generated/BDB036495/BDB036495.sdf
Basic Properties
Compound ID
E3L036495
Internal ID
BDB036495
Molecular formula
C21H21N5O8S
Molecular weight
503.493000
Exact mass
503.111084
XLogP
2.9077
TPSA
166.9000
HBA / HBD
11 / 3
Rotatable bonds
9
Heavy atoms / rings
35 / 4
Activity summary
Ki unknown 2.40000000 nM
5 activity record(s) imported
InChIKey
PTEINMLYFOJLND-UHFFFAOYSA-N
SMILES
COC(=O)c1cc(Nc2cc3onc(NS(=O)(=O)c4c(OC)cccc4OC)c3cc2OC)[nH]n1
Aliases
BDBM730842 (preferred) US20250122183, Example 055 (source_name) BDBM730842 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q6IE81 JADE1;KIAA1807;PHF17
Protein Jade-1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM730842 medium
; target=Histone acetyltransferase KAT6A
Q92794 KAT6A;MOZ;MYST3;RUNXBP2;ZNF220
Histone acetyltransferase KAT6A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM730842 medium
; target=Histone acetyltransferase KAT6A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM730842 Open - 10.7270/Q2V129C4
PubChem CID176511371 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COC(=O)c1cc(Nc2cc3onc(NS(=O)(=O)c4c(OC)cccc4OC)c3cc2OC)[nH]n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB036495/BDB036495.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB036495/BDB036495.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB036495/BDB036495.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB036495/BDB036495.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB036495/BDB036495.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone acetyltransferase KAT6A
Q92794
E3 ligase component 		BindingDB:BDBM730842 Ki 2.4 nM Very high DOI: 10.7270/Q2V129C4 1
Histone acetyltransferase KAT6A
Q92794
E3 ligase component 		BindingDB:BDBM730842 Ki 147 nM Moderate DOI: 10.7270/Q2V129C4 1
Histone acetyltransferase KAT6A
Q6IE81
E3 ligase component 		BindingDB:BDBM730842 Ki 663 nM Moderate DOI: 10.7270/Q2V129C4 1
Histone acetyltransferase KAT6A
Q92794
E3 ligase component 		BindingDB:BDBM730842 Ki 199 nM Moderate DOI: 10.7270/Q2V129C4 1
Histone acetyltransferase KAT6A
Q92794
E3 ligase component 		BindingDB:BDBM730842 Ki 663 nM Moderate DOI: 10.7270/Q2V129C4 1