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US20250122183, Example 089

E3L036529
Internal ID: BDB036529
Activity data available Local docking-ready structure
Dock with Q6IE81 Dock with Q92794
Structure
/e3_file/ligand_db/generated/BDB036529/BDB036529.sdf
Basic Properties
Compound ID
E3L036529
Internal ID
BDB036529
Molecular formula
C23H25N5O6S
Molecular weight
499.549000
Exact mass
499.152555
XLogP
4.1017
TPSA
129.7400
HBA / HBD
9 / 2
Rotatable bonds
8
Heavy atoms / rings
35 / 5
Activity summary
Ki unknown 3.00000000 nM
3 activity record(s) imported
InChIKey
QGCHZBWOIZTIEB-ZDUSSCGKSA-N
SMILES
COc1cc2c(NS(=O)(=O)c3c(OC)cccc3OC)noc2cc1Nc1cc2n(n1)CC[C@@H]2C
Aliases
BDBM730876 (preferred) US20250122183, Example 089 (source_name) BDBM730876 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q6IE81 JADE1;KIAA1807;PHF17
Protein Jade-1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM730876 medium
; target=Histone acetyltransferase KAT6A
Q92794 KAT6A;MOZ;MYST3;RUNXBP2;ZNF220
Histone acetyltransferase KAT6A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM730876 medium
; target=Histone acetyltransferase KAT6A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM730876 Open - 10.7270/Q2V129C4
PubChem CID176511404 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc2c(NS(=O)(=O)c3c(OC)cccc3OC)noc2cc1Nc1cc2n(n1)CC[C@@H]2C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB036529/BDB036529.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB036529/BDB036529.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB036529/BDB036529.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB036529/BDB036529.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB036529/BDB036529.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone acetyltransferase KAT6A
Q6IE81
E3 ligase component 		BindingDB:BDBM730876 Ki 39 nM High DOI: 10.7270/Q2V129C4 1
Histone acetyltransferase KAT6A
Q92794
E3 ligase component 		BindingDB:BDBM730876 Ki 3 nM Very high DOI: 10.7270/Q2V129C4 1
Histone acetyltransferase KAT6A
Q92794
E3 ligase component 		BindingDB:BDBM730876 Ki 39 nM High DOI: 10.7270/Q2V129C4 1