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US20250122183, Example 128

E3L036568
Internal ID: BDB036568
Activity data available Local docking-ready structure
Dock with Q6IE81 Dock with Q92794
Structure
/e3_file/ligand_db/generated/BDB036568/BDB036568.sdf
Basic Properties
Compound ID
E3L036568
Internal ID
BDB036568
Molecular formula
C25H22FN5O5S
Molecular weight
523.546000
Exact mass
523.132568
XLogP
5.5977
TPSA
131.3700
HBA / HBD
8 / 3
Rotatable bonds
9
Heavy atoms / rings
37 / 5
Activity summary
Ki unknown 38.00000000 nM
3 activity record(s) imported
InChIKey
WWPZACRNZVAJCV-UHFFFAOYSA-N
SMILES
CCc1cc(Nc2cc3onc(NS(=O)(=O)c4cccc(Oc5ccc(F)cc5)c4)c3cc2OC)n[nH]1
Aliases
BDBM730915 (preferred) US20250122183, Example 128 (source_name) BDBM730915 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q6IE81 JADE1;KIAA1807;PHF17
Protein Jade-1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM730915 medium
; target=Histone acetyltransferase KAT6A
Q92794 KAT6A;MOZ;MYST3;RUNXBP2;ZNF220
Histone acetyltransferase KAT6A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM730915 medium
; target=Histone acetyltransferase KAT6A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM730915 Open - 10.7270/Q2V129C4
PubChem CID176511443 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCc1cc(Nc2cc3onc(NS(=O)(=O)c4cccc(Oc5ccc(F)cc5)c4)c3cc2OC)n[nH]1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB036568/BDB036568.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB036568/BDB036568.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB036568/BDB036568.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB036568/BDB036568.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB036568/BDB036568.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone acetyltransferase KAT6A
Q92794
E3 ligase component 		BindingDB:BDBM730915 Ki 38 nM High DOI: 10.7270/Q2V129C4 1
Histone acetyltransferase KAT6A
Q6IE81
E3 ligase component 		BindingDB:BDBM730915 Ki 212 nM Moderate DOI: 10.7270/Q2V129C4 1
Histone acetyltransferase KAT6A
Q92794
E3 ligase component 		BindingDB:BDBM730915 Ki 212 nM Moderate DOI: 10.7270/Q2V129C4 1