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BDBM742135

E3L037603
Internal ID: BDB037603
Activity data available Local docking-ready structure
Dock with Q96GG9
Structure
/e3_file/ligand_db/generated/BDB037603/BDB037603.sdf
Basic Properties
Compound ID
E3L037603
Internal ID
BDB037603
Molecular formula
C34H28F4N6O5
Molecular weight
676.627000
Exact mass
676.205731
XLogP
4.4660
TPSA
137.6300
HBA / HBD
7 / 1
Rotatable bonds
9
Heavy atoms / rings
49 / 5
Activity summary
IC50 < 200.00000000 nM
2 activity record(s) imported
InChIKey
GDDZXSDXDPIMPE-IXCJQBJRSA-N
SMILES
CCN1C(=O)[C@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@H](c2ccc(F)cc2)c2c(C(=O)N(CC#N)CC(=O)OC)nn(-c3ccccc3)c21
Aliases
BDBM742135 (preferred) BDBM742135 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96GG9 DCUN1D1;DCN1;DCUN1L1;RP42;SCCRO
DCN1-like protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM742135 medium
; target=DCN1-like protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM742135 Open - 10.7270/Q2Z60TNT
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCN1C(=O)[C@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@H](c2ccc(F)cc2)c2c(C(=O)N(CC#N)CC(=O)OC)nn(-c3ccccc3)c21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB037603/BDB037603.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB037603/BDB037603.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB037603/BDB037603.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB037603/BDB037603.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB037603/BDB037603.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DCN1-like protein 1
Q96GG9
E3 ligase component 		BindingDB:BDBM742135 IC50 600 nM Moderate DOI: 10.7270/Q2Z60TNT 1
DCN1-like protein 1
Q96GG9
E3 ligase component 		BindingDB:BDBM742135 IC50 <200 nM Uncertain DOI: 10.7270/Q2Z60TNT 1