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US12310975, Example 280

E3L038054
Internal ID: BDB038054
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB038054/BDB038054.sdf
Basic Properties
Compound ID
E3L038054
Internal ID
BDB038054
Molecular formula
C42H48ClN11O7
Molecular weight
854.369000
Exact mass
853.342671
XLogP
1.9743
TPSA
194.6500
HBA / HBD
14 / 3
Rotatable bonds
11
Heavy atoms / rings
61 / 8
Activity summary
IC50 unknown 30.00000000 nM
1 activity record(s) imported
InChIKey
DENRWTCXEFWINX-UHFFFAOYSA-N
SMILES
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC(C)(C)N5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
Aliases
BDBM743741 (preferred) US12310975, Example 280 (source_name) BDBM743741 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM743741 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM743741 Open - 10.7270/Q28G8R8N
PubChem CID156292401 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC(C)(C)N5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB038054/BDB038054.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB038054/BDB038054.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB038054/BDB038054.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB038054/BDB038054.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB038054/BDB038054.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component
BindingDB:BDBM743741 IC50 30 nM High DOI: 10.7270/Q28G8R8N 1