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US12310975, Example 287

E3L038061
Internal ID: BDB038061
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB038061/BDB038061.sdf
Basic Properties
Compound ID
E3L038061
Internal ID
BDB038061
Molecular formula
C42H49ClN10O7
Molecular weight
841.370000
Exact mass
840.347422
XLogP
3.3420
TPSA
189.7200
HBA / HBD
13 / 3
Rotatable bonds
10
Heavy atoms / rings
60 / 8
Activity summary
IC50 > 100.00000000 nM
1 activity record(s) imported
InChIKey
GVQGKMJIZDUMIQ-UHFFFAOYSA-N
SMILES
CNC(=O)CCC1Oc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2N(C)C1=O
Aliases
BDBM743748 (preferred) US12310975, Example 287 (source_name) BDBM743748 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM743748 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM743748 Open - 10.7270/Q28G8R8N
PubChem CID176371060 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)CCC1Oc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2N(C)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB038061/BDB038061.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB038061/BDB038061.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB038061/BDB038061.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB038061/BDB038061.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB038061/BDB038061.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM743748 IC50 >100 nM Uncertain DOI: 10.7270/Q28G8R8N 1