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US12310975, Example 290

E3L038064
Internal ID: BDB038064
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB038064/BDB038064.sdf
Basic Properties
Compound ID
E3L038064
Internal ID
BDB038064
Molecular formula
C37H39ClN8O9
Molecular weight
775.219000
Exact mass
774.252853
XLogP
2.5876
TPSA
201.7000
HBA / HBD
13 / 3
Rotatable bonds
11
Heavy atoms / rings
55 / 7
Activity summary
IC50 unknown 75.00000000 nM
1 activity record(s) imported
InChIKey
MNBVZPNADXUZFG-ZJOVHXHXSA-N
SMILES
CNC(=O)CCC1Oc2cc(Nc3nc(N4CCO[C@H](COc5ccc6c(c5)C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc2N(C(C)C)C1=O
Aliases
BDBM743751 (preferred) US12310975, Example 290 (source_name) BDBM743751 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM743751 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM743751 Open - 10.7270/Q28G8R8N
PubChem CID176734214 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)CCC1Oc2cc(Nc3nc(N4CCO[C@H](COc5ccc6c(c5)C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc2N(C(C)C)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB038064/BDB038064.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB038064/BDB038064.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB038064/BDB038064.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB038064/BDB038064.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB038064/BDB038064.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component
BindingDB:BDBM743751 IC50 75 nM High DOI: 10.7270/Q28G8R8N 1