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US12310975, Example 298

E3L038072
Internal ID: BDB038072
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB038072/BDB038072.sdf
Basic Properties
Compound ID
E3L038072
Internal ID
BDB038072
Molecular formula
C42H45ClN10O7
Molecular weight
837.338000
Exact mass
836.316121
XLogP
2.7730
TPSA
191.4100
HBA / HBD
13 / 3
Rotatable bonds
11
Heavy atoms / rings
60 / 9
Activity summary
IC50 < 10.00000000 nM
1 activity record(s) imported
InChIKey
LVKBSNFAPCKBCD-UHFFFAOYSA-N
SMILES
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC(CN5CC6(C5)CN(c5ccc7c(c5)C(=O)N(C5CCC(=O)NC5=O)C7=O)C6)CC4)ncc3Cl)ccc21
Aliases
BDBM743759 (preferred) US12310975, Example 298 (source_name) BDBM743759 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM743759 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM743759 Open - 10.7270/Q28G8R8N
PubChem CID176370922 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC(CN5CC6(C5)CN(c5ccc7c(c5)C(=O)N(C5CCC(=O)NC5=O)C7=O)C6)CC4)ncc3Cl)ccc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB038072/BDB038072.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB038072/BDB038072.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB038072/BDB038072.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB038072/BDB038072.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB038072/BDB038072.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM743759 IC50 <10 nM Very high DOI: 10.7270/Q28G8R8N 1