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US12310975, Example 338

E3L038110
Internal ID: BDB038110
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB038110/BDB038110.sdf
Basic Properties
Compound ID
E3L038110
Internal ID
BDB038110
Molecular formula
C43H49ClN10O7
Molecular weight
853.381000
Exact mass
852.347422
XLogP
3.4588
TPSA
191.4100
HBA / HBD
13 / 3
Rotatable bonds
12
Heavy atoms / rings
61 / 8
Activity summary
IC50 < 10.00000000 nM
1 activity record(s) imported
InChIKey
BRTQHPMVTJGLOO-UHFFFAOYSA-N
SMILES
CCCC(C1CCN(c2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)CC1)N1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)cc(OCC(=O)NC)c(=O)n4C)n2)CC1
Aliases
BDBM743797 (preferred) US12310975, Example 338 (source_name) BDBM743797 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM743797 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM743797 Open - 10.7270/Q28G8R8N
PubChem CID156292905 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCCC(C1CCN(c2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)CC1)N1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)cc(OCC(=O)NC)c(=O)n4C)n2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB038110/BDB038110.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB038110/BDB038110.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB038110/BDB038110.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB038110/BDB038110.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB038110/BDB038110.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component
BindingDB:BDBM743797 IC50 <10 nM Very high DOI: 10.7270/Q28G8R8N 1