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US12310975, Example 449

E3L038216
Internal ID: BDB038216
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB038216/BDB038216.sdf
Basic Properties
Compound ID
E3L038216
Internal ID
BDB038216
Molecular formula
C45H54ClN9O8
Molecular weight
884.435000
Exact mass
883.378387
XLogP
4.8724
TPSA
198.3500
HBA / HBD
13 / 4
Rotatable bonds
13
Heavy atoms / rings
63 / 8
Activity summary
IC50 > 100.00000000 nM
1 activity record(s) imported
InChIKey
MRGAAVRNUHLWNM-UHFFFAOYSA-N
SMILES
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(OC5CC6(CCN(c7cccc(C(=O)NC8CCC(=O)NC8=O)c7OC)CC6)C5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
Aliases
BDBM743903 (preferred) US12310975, Example 449 (source_name) BDBM743903 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM743903 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM743903 Open - 10.7270/Q28G8R8N
PubChem CID156292471 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)COc1cc2cc(Nc3nc(N4CCC(OC5CC6(CCN(c7cccc(C(=O)NC8CCC(=O)NC8=O)c7OC)CC6)C5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB038216/BDB038216.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB038216/BDB038216.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB038216/BDB038216.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB038216/BDB038216.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB038216/BDB038216.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component
BindingDB:BDBM743903 IC50 >100 nM Uncertain DOI: 10.7270/Q28G8R8N 1