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H-Arg-DL-xiIle-Phe-NH2

E3L038795
Internal ID: BDB038795
Activity data available Local docking-ready structure
Dock with Q8IWV7 Dock with Q8IWV8
Structure
/e3_file/ligand_db/generated/BDB038795/BDB038795.sdf
Basic Properties
Compound ID
E3L038795
Internal ID
BDB038795
Molecular formula
C21H35N7O3
Molecular weight
433.557000
Exact mass
433.280138
XLogP
-0.6793
TPSA
189.2100
HBA / HBD
5 / 7
Rotatable bonds
13
Heavy atoms / rings
31 / 1
Activity summary
Ki unknown 5500.00000000 nM
2 activity record(s) imported
InChIKey
XVVYOVGROLTMFF-DBGUYSSFSA-N
SMILES
CCC(C)C(NC(=O)[C@@H](N)CCCNC(=N)N)C(=O)N[C@@H](Cc1ccccc1)C(N)=O
Aliases
BDBM748339 (preferred) H-Arg-DL-xiIle-Phe-NH2 (source_name) BDBM748339 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q8IWV7 UBR1
E3 ubiquitin-protein ligase UBR1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM748339 medium
; target=E3 ubiquitin-protein ligase UBR1
Q8IWV8 UBR2;C6orf133;KIAA0349
E3 ubiquitin-protein ligase UBR2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM748339 medium
; target=E3 ubiquitin-protein ligase UBR2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM748339 Open - 10.7270/Q26D5ZKQ
PubChem CID169180625 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCC(C)C(NC(=O)[C@@H](N)CCCNC(=N)N)C(=O)N[C@@H](Cc1ccccc1)C(N)=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB038795/BDB038795.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB038795/BDB038795.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB038795/BDB038795.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB038795/BDB038795.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB038795/BDB038795.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase UBR1
Q8IWV7
E3 ligase component 		BindingDB:BDBM748339 Ki 5500 nM Low DOI: 10.7270/Q26D5ZKQ 1
E3 ubiquitin-protein ligase UBR2
Q8IWV8
E3 ligase component 		BindingDB:BDBM748339 Ki 5500 nM Low DOI: 10.7270/Q26D5ZKQ 1