< Back to small molecule database

BDBM757059

E3L039692
Internal ID: BDB039692
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB039692/BDB039692.sdf
Basic Properties
Compound ID
E3L039692
Internal ID
BDB039692
Molecular formula
C24H28N6O2
Molecular weight
432.528000
Exact mass
432.227374
XLogP
2.0933
TPSA
94.2200
HBA / HBD
6 / 2
Rotatable bonds
5
Heavy atoms / rings
32 / 5
Activity summary
IC50 unknown 2.70000000 nM
1 activity record(s) imported
InChIKey
NTLIPIHZQJVWJM-ZMFCMNQTSA-N
SMILES
CCc1nc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4)C4CC[C@H]43)cc2[nH]c1=O
Aliases
BDBM757059 (preferred) BDBM757059 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM757059 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM757059 Open - 10.7270/Q24M9997
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCc1nc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4)C4CC[C@H]43)cc2[nH]c1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB039692/BDB039692.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB039692/BDB039692.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB039692/BDB039692.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB039692/BDB039692.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB039692/BDB039692.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM757059 IC50 2.7 nM Very high DOI: 10.7270/Q24M9997 1