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BDBM757858

E3L039924
Internal ID: BDB039924
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB039924/BDB039924.sdf
Basic Properties
Compound ID
E3L039924
Internal ID
BDB039924
Molecular formula
C28H27F4N5O3
Molecular weight
557.548000
Exact mass
557.205003
XLogP
3.8053
TPSA
72.7200
HBA / HBD
6 / 0
Rotatable bonds
6
Heavy atoms / rings
40 / 7
Activity summary
IC50 unknown 500.00000000 nM
1 activity record(s) imported
InChIKey
MFVQEFACKDHUJX-HSZRJFAPSA-N
SMILES
Cn1cnnc1[C@@H](F)C1(c2cccc(N3Cc4c(cc(CN5CC6(COC6)C5)cc4C(F)(F)F)C3=O)c2)COC1
Aliases
BDBM757858 (preferred) (S)-6-(2-oxa-6-azaspiro[3.3]heptan-6-ylmethyl)-2-(3-(3-(fluoro(4-methyl-4H-1,2,4-triazol-3-yl)methyl)oxetan-3-yl)phenyl)-4-(trifluoromethyl)isoindolin-1-one (source_name) BDBM757858 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM757858 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM757858 Open - 10.7270/Q22N572G
PubChem CID164869250 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1cnnc1[C@@H](F)C1(c2cccc(N3Cc4c(cc(CN5CC6(COC6)C5)cc4C(F)(F)F)C3=O)c2)COC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB039924/BDB039924.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB039924/BDB039924.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB039924/BDB039924.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB039924/BDB039924.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB039924/BDB039924.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component 		BindingDB:BDBM757858 IC50 500 nM Moderate DOI: 10.7270/Q22N572G 1