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BDBM758056

E3L040109
Internal ID: BDB040109
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB040109/BDB040109.sdf
Basic Properties
Compound ID
E3L040109
Internal ID
BDB040109
Molecular formula
C32H37F4N5O2
Molecular weight
599.673000
Exact mass
599.288338
XLogP
5.6481
TPSA
64.7000
HBA / HBD
5 / 1
Rotatable bonds
7
Heavy atoms / rings
43 / 6
Activity summary
IC50 unknown 100.00000000 nM
1 activity record(s) imported
InChIKey
BJSDLYMBLUPMEP-SCBLGKRXSA-N
SMILES
Cc1cn[nH]c1C(F)C1(c2cccc(N3Cc4c(cc(CN5CCN(C)C[C@@H]5C(C)C)cc4C(F)(F)F)C3=O)c2)COC1
Aliases
BDBM758056 (preferred) 2-[3-[3-[fluoro-(4-methyl-1H-pyrazol-5-yl)methyl]oxetan-3-yl]phenyl]-6-[[(2S)-4-methyl-2-propan-2-ylpiperazin-1-yl]methyl]-4-(trifluoromethyl)-3H-isoindol-1-one (source_name) BDBM758056 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM758056 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM758056 Open - 10.7270/Q22N572G
PubChem CID164869389 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cn[nH]c1C(F)C1(c2cccc(N3Cc4c(cc(CN5CCN(C)C[C@@H]5C(C)C)cc4C(F)(F)F)C3=O)c2)COC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB040109/BDB040109.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB040109/BDB040109.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB040109/BDB040109.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB040109/BDB040109.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB040109/BDB040109.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component 		BindingDB:BDBM758056 IC50 100 nM High DOI: 10.7270/Q22N572G 1